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92 lines
3.5 KiB
92 lines
3.5 KiB
// <copyright file="Correlation.cs" company="Math.NET">
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// Math.NET Numerics, part of the Math.NET Project
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// http://numerics.mathdotnet.com
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// http://github.com/mathnet/mathnet-numerics
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// http://mathnetnumerics.codeplex.com
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//
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// Copyright (c) 2009-2010 Math.NET
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//
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// Permission is hereby granted, free of charge, to any person
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// obtaining a copy of this software and associated documentation
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// files (the "Software"), to deal in the Software without
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// restriction, including without limitation the rights to use,
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// copy, modify, merge, publish, distribute, sublicense, and/or sell
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// copies of the Software, and to permit persons to whom the
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// Software is furnished to do so, subject to the following
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// conditions:
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//
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// The above copyright notice and this permission notice shall be
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// included in all copies or substantial portions of the Software.
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//
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// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
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// EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
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// OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
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// NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
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// HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
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// WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
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// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
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// OTHER DEALINGS IN THE SOFTWARE.
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// </copyright>
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namespace MathNet.Numerics.Statistics
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{
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using System;
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using System.Collections.Generic;
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using Properties;
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/// <summary>
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/// A class with correlation measures between two datasets.
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/// </summary>
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public static class Correlation
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{
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/// <summary>
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/// Computes the Pearson product-moment correlation coefficient.
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/// </summary>
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/// <param name="dataA">Sample data A.</param>
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/// <param name="dataB">Sample data B.</param>
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/// <returns>The Pearson product-moment correlation coefficient.</returns>
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public static double Pearson(IEnumerable<double> dataA, IEnumerable<double> dataB)
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{
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int n = 0;
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double r = 0.0;
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double meanA = 0;
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double meanB = 0;
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double varA = 0;
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double varB = 0;
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using (IEnumerator<double> ieA = dataA.GetEnumerator())
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using (IEnumerator<double> ieB = dataB.GetEnumerator())
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{
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while (ieA.MoveNext())
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{
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if (!ieB.MoveNext())
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{
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throw new ArgumentOutOfRangeException("dataB", "Datasets dataA and dataB need to have the same length. dataB is shorter.");
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}
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double Acurrent = ieA.Current;
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double Bcurrent = ieB.Current;
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double deltaA = Acurrent - meanA;
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double scaleDeltaA = deltaA / ++n;
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double deltaB = Bcurrent - meanB;
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double scaleDeltaB = deltaB / n;
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meanA += scaleDeltaA;
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meanB += scaleDeltaB;
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varA += scaleDeltaA * deltaA * (n - 1);
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varB += scaleDeltaB * deltaB * (n - 1);
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r += ((deltaA * deltaB * (n - 1)) / n);
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}
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if (ieB.MoveNext())
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{
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throw new ArgumentOutOfRangeException("dataA", "Datasets dataA and dataB need to have the same length. dataA is shorter.");
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}
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}
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return r / Math.Sqrt(varA * varB);
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}
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}
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}
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