csharpfftfsharpintegrationinterpolationlinear-algebramathdifferentiationmatrixnumericsrandomregressionstatisticsmathnet
You can not select more than 25 topics
Topics must start with a letter or number, can include dashes ('-') and can be up to 35 characters long.
253 lines
8.8 KiB
253 lines
8.8 KiB
// <copyright file="MultinomialTests.cs" company="Math.NET">
|
|
// Math.NET Numerics, part of the Math.NET Project
|
|
// http://numerics.mathdotnet.com
|
|
// http://github.com/mathnet/mathnet-numerics
|
|
//
|
|
// Copyright (c) 2009-2016 Math.NET
|
|
//
|
|
// Permission is hereby granted, free of charge, to any person
|
|
// obtaining a copy of this software and associated documentation
|
|
// files (the "Software"), to deal in the Software without
|
|
// restriction, including without limitation the rights to use,
|
|
// copy, modify, merge, publish, distribute, sublicense, and/or sell
|
|
// copies of the Software, and to permit persons to whom the
|
|
// Software is furnished to do so, subject to the following
|
|
// conditions:
|
|
//
|
|
// The above copyright notice and this permission notice shall be
|
|
// included in all copies or substantial portions of the Software.
|
|
//
|
|
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
|
|
// EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
|
|
// OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
|
|
// NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
|
|
// HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
|
|
// WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
|
|
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
|
|
// OTHER DEALINGS IN THE SOFTWARE.
|
|
// </copyright>
|
|
|
|
using System;
|
|
using System.Linq;
|
|
using MathNet.Numerics.Distributions;
|
|
using MathNet.Numerics.Statistics;
|
|
using NUnit.Framework;
|
|
|
|
namespace MathNet.Numerics.UnitTests.DistributionTests.Multivariate
|
|
{
|
|
/// <summary>
|
|
/// Multinomial distribution tests.
|
|
/// </summary>
|
|
[TestFixture, Category("Distributions")]
|
|
public class MultinomialTests
|
|
{
|
|
/// <summary>
|
|
/// Bad proportion of ratios.
|
|
/// </summary>
|
|
private double[] _badP;
|
|
|
|
/// <summary>
|
|
/// Another bad proportion of ratios.
|
|
/// </summary>
|
|
private double[] _badP2;
|
|
|
|
/// <summary>
|
|
/// Small array with proportion of ratios
|
|
/// </summary>
|
|
private double[] _smallP;
|
|
|
|
/// <summary>
|
|
/// Large array with proportion of ratios
|
|
/// </summary>
|
|
private double[] _largeP;
|
|
|
|
/// <summary>
|
|
/// Set-up tests parameters.
|
|
/// </summary>
|
|
[SetUp]
|
|
public void SetUp()
|
|
{
|
|
Control.CheckDistributionParameters = true;
|
|
_badP = new[] { -1.0, 1.0 };
|
|
_badP2 = new[] { 0.0, 0.0 };
|
|
_smallP = new[] { 1.0, 1.0, 1.0 };
|
|
_largeP = new[] { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0 };
|
|
}
|
|
|
|
/// <summary>
|
|
/// Can create Multinomial
|
|
/// </summary>
|
|
[Test]
|
|
public void CanCreateMultinomial()
|
|
{
|
|
var m = new Multinomial(_largeP, 4);
|
|
CollectionAssert.AreEqual(_largeP, m.P);
|
|
}
|
|
|
|
/// <summary>
|
|
/// Can create Multinomial from a histogram.
|
|
/// </summary>
|
|
[Test]
|
|
public void CanCreateMultinomialFromHistogram()
|
|
{
|
|
double[] smallDataset = { 0.5, 1.5, 2.5, 3.5, 4.5, 5.5, 6.5, 7.5, 8.5, 9.5 };
|
|
var hist = new Histogram(smallDataset, 10, 0.0, 10.0);
|
|
var m = new Multinomial(hist, 7);
|
|
|
|
foreach (var t in m.P)
|
|
{
|
|
Assert.AreEqual(1.0, t);
|
|
}
|
|
}
|
|
|
|
/// <summary>
|
|
/// Multinomial create fails with <c>null</c> histogram.
|
|
/// </summary>
|
|
[Test]
|
|
public void MultinomialCreateFailsWithNullHistogram()
|
|
{
|
|
Histogram h = null;
|
|
// ReSharper disable once ExpressionIsAlwaysNull
|
|
Assert.That(() => new Categorical(h), Throws.TypeOf<ArgumentNullException>());
|
|
}
|
|
|
|
/// <summary>
|
|
/// Multinomial create fails with negative ratios.
|
|
/// </summary>
|
|
[Test]
|
|
public void MultinomialCreateFailsWithNegativeRatios()
|
|
{
|
|
Assert.That(() => new Multinomial(_badP, 4), Throws.ArgumentException);
|
|
}
|
|
|
|
/// <summary>
|
|
/// Multinomial create fails with all zero ratios.
|
|
/// </summary>
|
|
[Test]
|
|
public void MultinomialCreateFailsWithAllZeroRatios()
|
|
{
|
|
Assert.That(() => new Multinomial(_badP2, 4), Throws.ArgumentException);
|
|
}
|
|
|
|
/// <summary>
|
|
/// Validate ToString.
|
|
/// </summary>
|
|
[Test]
|
|
public void ValidateToString()
|
|
{
|
|
System.Threading.Thread.CurrentThread.CurrentCulture = System.Globalization.CultureInfo.InvariantCulture;
|
|
var b = new Multinomial(_smallP, 4);
|
|
Assert.AreEqual("Multinomial(Dimension = 3, Number of Trails = 4)", b.ToString());
|
|
}
|
|
|
|
/// <summary>
|
|
/// Validate skewness.
|
|
/// </summary>
|
|
/// <param name="p">Proportion of ratios.</param>
|
|
/// <param name="n">Number of trials.</param>
|
|
/// <param name="res">Expected value.</param>
|
|
[TestCase(new[] { 0.3, 0.7 }, 5, new[] { 0.390360029179413, -0.390360029179413 })]
|
|
[TestCase(new[] { 0.1, 0.3, 0.6 }, 10, new[] { 0.843274042711568, 0.276026223736942, -0.129099444873581 })]
|
|
[TestCase(new[] { 0.15, 0.35, 0.3, 0.2 }, 20, new[] { 0.438357003759605, 0.140642169281549, 0.195180014589707, 0.335410196624968 })]
|
|
public void ValidateSkewness(double[] p, int n, double[] res)
|
|
{
|
|
var b = new Multinomial(p, n);
|
|
for (var i = 0; i < b.P.Length; i++)
|
|
{
|
|
AssertHelpers.AlmostEqualRelative(res[i], b.Skewness[i], 12);
|
|
}
|
|
}
|
|
|
|
/// <summary>
|
|
/// Validate variance.
|
|
/// </summary>
|
|
/// <param name="p">Proportion of ratios.</param>
|
|
/// <param name="n">Number of trials.</param>
|
|
/// <param name="res">Expected value.</param>
|
|
[TestCase(new[] { 0.3, 0.7 }, 5, new[] { 1.05, 1.05 })]
|
|
[TestCase(new[] { 0.1, 0.3, 0.6 }, 10, new[] { 0.9, 2.1, 2.4 })]
|
|
[TestCase(new[] { 0.15, 0.35, 0.3, 0.2 }, 20, new[] { 2.55, 4.55, 4.2, 3.2 })]
|
|
public void ValidateVariance(double[] p, int n, double[] res)
|
|
{
|
|
var b = new Multinomial(p, n);
|
|
for (var i = 0; i < b.P.Length; i++)
|
|
{
|
|
AssertHelpers.AlmostEqualRelative(res[i], b.Variance[i], 12);
|
|
}
|
|
}
|
|
|
|
/// <summary>
|
|
/// Validate mean.
|
|
/// </summary>
|
|
/// <param name="p">Proportion of ratios.</param>
|
|
/// <param name="n">Number of trials.</param>
|
|
/// <param name="res">Expected value.</param>
|
|
[TestCase(new[] { 0.3, 0.7 }, 5, new[] { 1.5, 3.5 })]
|
|
[TestCase(new[] { 0.1, 0.3, 0.6 }, 10, new[] { 1.0, 3.0, 6.0 })]
|
|
[TestCase(new[] { 0.15, 0.35, 0.3, 0.2 }, 20, new[] { 3.0, 7.0, 6.0, 4.0 })]
|
|
public void ValidateMean(double[] p, int n, double[] res)
|
|
{
|
|
var b = new Multinomial(p, n);
|
|
for (var i = 0; i < b.P.Length; i++)
|
|
{
|
|
AssertHelpers.AlmostEqualRelative(res[i], b.Mean[i], 12);
|
|
}
|
|
}
|
|
|
|
/// <summary>
|
|
/// Validate probability.
|
|
/// </summary>
|
|
/// <param name="p">Proportion of ratios.</param>
|
|
/// <param name="x">Input X value.</param>
|
|
/// <param name="res">Expected value.</param>
|
|
[TestCase(new[] { 0.3, 0.7 }, new[] { 1, 9 }, 0.121060821)]
|
|
[TestCase(new[] { 0.1, 0.3, 0.6 }, new[] { 1, 3, 6 }, 0.105815808)]
|
|
[TestCase(new[] { 0.15, 0.35, 0.3, 0.2 }, new[] { 1, 1, 1, 7 }, 0.000145152)]
|
|
public void ValidateProbability(double[] p, int[] x, double res)
|
|
{
|
|
var b = new Multinomial(p, x.Sum());
|
|
AssertHelpers.AlmostEqualRelative(b.Probability(x), res, 12);
|
|
}
|
|
|
|
/// <summary>
|
|
/// Validate probability log.
|
|
/// </summary>
|
|
/// <param name="x">Input X value.</param>
|
|
[TestCase(new[] { 1, 2, 3, 4, 5, 6, 7, 8, 9 })]
|
|
[TestCase(new[] { 1, 1, 1, 2, 2, 2, 3, 3, 3 })]
|
|
[TestCase(new[] { 5, 6, 7, 8, 7, 6, 5, 4, 3 })]
|
|
public void ValidateProbabilityLn(int[] x)
|
|
{
|
|
var b = new Multinomial(_largeP, x.Sum());
|
|
AssertHelpers.AlmostEqualRelative(b.ProbabilityLn(x), Math.Log(b.Probability(x)), 12);
|
|
}
|
|
|
|
/// <summary>
|
|
/// Can sample static.
|
|
/// </summary>
|
|
[Test]
|
|
public void CanSampleStatic()
|
|
{
|
|
Multinomial.Sample(new System.Random(0), _largeP, 4);
|
|
}
|
|
|
|
/// <summary>
|
|
/// Sample static fails with bad parameters.
|
|
/// </summary>
|
|
[Test]
|
|
public void FailSampleStatic()
|
|
{
|
|
Assert.That(() => Multinomial.Sample(new System.Random(0), _badP, 4), Throws.ArgumentException);
|
|
}
|
|
|
|
/// <summary>
|
|
/// Can sample.
|
|
/// </summary>
|
|
[Test]
|
|
public void CanSample()
|
|
{
|
|
var n = new Multinomial(_largeP, 4);
|
|
n.Sample();
|
|
}
|
|
}
|
|
}
|
|
|