//
// Math.NET Numerics, part of the Math.NET Project
// http://numerics.mathdotnet.com
// http://github.com/mathnet/mathnet-numerics
// http://mathnetnumerics.codeplex.com
//
// Copyright (c) 2009-2013 Math.NET
//
// Permission is hereby granted, free of charge, to any person
// obtaining a copy of this software and associated documentation
// files (the "Software"), to deal in the Software without
// restriction, including without limitation the rights to use,
// copy, modify, merge, publish, distribute, sublicense, and/or sell
// copies of the Software, and to permit persons to whom the
// Software is furnished to do so, subject to the following
// conditions:
//
// The above copyright notice and this permission notice shall be
// included in all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
// EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
// OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
// NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
// HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
// WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
// OTHER DEALINGS IN THE SOFTWARE.
//
namespace MathNet.Numerics.UnitTests.StatisticsTests
{
#if !PORTABLE
using System;
using System.Collections.Generic;
using System.Linq;
using NUnit.Framework;
using Statistics;
///
/// Correlation tests
///
/// NOTE: this class is not included into Silverlight version, because it uses data from local files.
/// In Silverlight access to local files is forbidden, except several cases.
[TestFixture, Category("Statistics")]
public class CorrelationTests
{
///
/// Statistics data.
///
readonly IDictionary _data = new Dictionary();
///
/// Initializes a new instance of the CorrelationTests class.
///
public CorrelationTests()
{
var lottery = new StatTestData("./data/NIST/Lottery.dat");
_data.Add("lottery", lottery);
var lew = new StatTestData("./data/NIST/Lew.dat");
_data.Add("lew", lew);
}
///
/// Pearson correlation test.
///
[Test]
public void PearsonCorrelationTest()
{
var dataA = _data["lottery"].Data.Take(200);
var dataB = _data["lew"].Data.Take(200);
var corr = Correlation.Pearson(dataA, dataB);
AssertHelpers.AlmostEqual(-0.029470861580726, corr, 14);
}
///
/// Pearson correlation test.
///
[Test]
public void PearsonCorrelationConsistentWithCovariance()
{
var dataA = _data["lottery"].Data.Take(200).ToArray();
var dataB = _data["lew"].Data.Take(200).ToArray();
var direct = Correlation.Pearson(dataA, dataB);
var covariance = dataA.Covariance(dataB)/(dataA.StandardDeviation()*dataB.StandardDeviation());
AssertHelpers.AlmostEqual(covariance, direct, 14);
}
///
/// Constant-weighted Pearson correlation test.
///
[Test]
public void ConstantWeightedPearsonCorrelationTest()
{
var dataA = _data["lottery"].Data.Take(200);
var dataB = _data["lew"].Data.Take(200);
var weights = Generate.Repeat(200, 2.0);
var corr = Correlation.Pearson(dataA, dataB);
var corr2 = Correlation.WeightedPearson(dataA, dataB, weights);
AssertHelpers.AlmostEqual(corr, corr2, 14);
}
///
/// Pearson correlation test fail.
///
[Test]
public void PearsonCorrelationTestFail()
{
var dataA = _data["lottery"].Data;
var dataB = _data["lew"].Data;
Assert.That(() => Correlation.Pearson(dataA, dataB), Throws.TypeOf());
}
///
/// Spearman correlation test.
///
[Test]
public void SpearmanCorrelationTest()
{
var dataA = _data["lottery"].Data.Take(200);
var dataB = _data["lew"].Data.Take(200);
var corr = Correlation.Spearman(dataA, dataB);
AssertHelpers.AlmostEqual(-0.0382856977898528, corr, 14);
}
///
/// Spearman correlation test fail.
///
[Test]
public void SpearmanCorrelationTestFail()
{
var dataA = _data["lottery"].Data;
var dataB = _data["lew"].Data;
Assert.That(() => Correlation.Spearman(dataA, dataB), Throws.TypeOf());
}
}
#endif
}