Math.NET Numerics
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// <copyright file="RSquaredTest.cs" company="Math.NET">
// Math.NET Numerics, part of the Math.NET Project
// http://numerics.mathdotnet.com
// http://github.com/mathnet/mathnet-numerics
//
// Copyright (c) 2009-2016 Math.NET
//
// Permission is hereby granted, free of charge, to any person
// obtaining a copy of this software and associated documentation
// files (the "Software"), to deal in the Software without
// restriction, including without limitation the rights to use,
// copy, modify, merge, publish, distribute, sublicense, and/or sell
// copies of the Software, and to permit persons to whom the
// Software is furnished to do so, subject to the following
// conditions:
//
// The above copyright notice and this permission notice shall be
// included in all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
// EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
// OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
// NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
// HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
// WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
// OTHER DEALINGS IN THE SOFTWARE.
// </copyright>
using System;
using System.Collections.Generic;
using NUnit.Framework;
namespace MathNet.Numerics.UnitTests.GoodnessOfFit
{
[TestFixture, Category("Regression")]
public class RSquaredTest
{
/// <summary>
/// Test the R-squared value of a values with itself
/// </summary>
[Test]
public void WhenCalculatingRSquaredOfLinearDistributionWithItselfThenRSquaredIsOne()
{
var data = new List<double>();
for (int i = 1; i <= 10; i++)
{
data.Add(i);
}
Assert.That(Numerics.GoodnessOfFit.RSquared(data, data), Is.EqualTo(1));
}
/// <summary>
/// Test the R-squared value of values with itself
/// </summary>
[Test]
public void CoefficentOfDetermination_OfDataWithItself_EqualsOne()
{
var data = Generate.LinearRange(1, 100);
AssertHelpers.AlmostEqual(Numerics.GoodnessOfFit.CoefficientOfDetermination(data, data), 1.0, 14);
}
/// <summary>
/// Test the R-squared value of values with correlated values
/// </summary>
[Test]
public void CoefficentOfDetermination_OfCorrelatedData_DoesNotEqualOne()
{
// parameters
int n = 100;
int offset = 1;
// actual values and comparison
var data = Generate.LinearRange(1, n);
var model = Generate.LinearRange(1+offset, n+offset);
double R2Calc = Numerics.GoodnessOfFit.CoefficientOfDetermination(model, data);
Assert.That(R2Calc, Is.Not.EqualTo(1));
}
/// <summary>
/// Test the R-squared value of values with correlated values
/// </summary>
[Test]
public void CoefficentOfDetermination_OfCorrelatedData_KnownOutput()
{
// parameters
int n = 100;
int offset = 1;
// theoretical values
double ssTot = (n*(n-1)*(n+1))/12.0;
double ssRes = n*offset*offset;
double R2 = 1-ssRes/ssTot;
// actual values and comparison
var data = Generate.LinearRange(1, n);
var model = Generate.LinearRange(1+offset, n+offset);
double R2Calc = Numerics.GoodnessOfFit.CoefficientOfDetermination(model, data);
AssertHelpers.AlmostEqual(R2Calc, R2, 14);
}
[Test]
public void WhenGivenTwoDatasetsOfDifferentSizeThenThrowsArgumentException()
{
var observedData = new List<double> { 23, 9, 5, 7, 10, 5, 4, 1, 2, 1 };
var modelledData = new List<double> { 8, 9, 10 };
Assert.Throws<ArgumentOutOfRangeException>(() => Numerics.GoodnessOfFit.RSquared(modelledData, observedData));
}
[Test]
public void WhenCalculatingRSquaredOfUnevenDistributionWithLInearDistributionThenRSquaredIsCalculated()
{
var observedData = new List<double> { 1, 2.3, 3.1, 4.8, 5.6, 6.3 };
var modelledData = new List<double> { 2.6, 2.8, 3.1, 4.7, 5.1, 5.3 };
Assert.That(Math.Round(Numerics.GoodnessOfFit.RSquared(modelledData, observedData), 11), Is.EqualTo(Math.Round(0.94878520708673d, 11)));
}
}
}