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Examples: Add F# linear regressions sample (from blog)

v2
Christoph Ruegg 14 years ago
parent
commit
617423495a
  1. 7
      src/FSharpExamples/FSharpExamples.fsproj
  2. 117
      src/FSharpExamples/LinearRegression.fsx

7
src/FSharpExamples/FSharpExamples.fsproj

@ -60,11 +60,12 @@
</ProjectReference>
</ItemGroup>
<ItemGroup>
<None Include="DenseVector.fsx" />
<None Include="Apply.fsx" />
<None Include="RandomAndDistributions.fsx" />
<None Include="Histogram.fsx" />
<None Include="MCMC.fsx" />
<None Include="RandomAndDistributions.fsx" />
<None Include="DenseVector.fsx" />
<None Include="LinearRegression.fsx" />
<None Include="Apply.fsx" />
</ItemGroup>
<PropertyGroup>
<MinimumVisualStudioVersion Condition="'$(MinimumVisualStudioVersion)' == ''">11</MinimumVisualStudioVersion>

117
src/FSharpExamples/LinearRegression.fsx

@ -0,0 +1,117 @@
// <copyright file="LinearRegression.fsx" company="Math.NET">
// Math.NET Numerics, part of the Math.NET Project
// http://numerics.mathdotnet.com
// http://github.com/mathnet/mathnet-numerics
// http://mathnetnumerics.codeplex.com
//
// Copyright (c) 2009-2013 Math.NET
//
// Permission is hereby granted, free of charge, to any person
// obtaining a copy of this software and associated documentation
// files (the "Software"), to deal in the Software without
// restriction, including without limitation the rights to use,
// copy, modify, merge, publish, distribute, sublicense, and/or sell
// copies of the Software, and to permit persons to whom the
// Software is furnished to do so, subject to the following
// conditions:
//
// The above copyright notice and this permission notice shall be
// included in all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
// EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
// OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
// NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
// HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
// WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
// OTHER DEALINGS IN THE SOFTWARE.
// </copyright>
#r "../../out/lib/Net40/MathNet.Numerics.dll"
#r "../../out/lib/Net40/MathNet.Numerics.FSharp.dll"
open System
open MathNet.Numerics
open MathNet.Numerics.LinearAlgebra
open MathNet.Numerics.LinearAlgebra.Double
open MathNet.Numerics.Distributions
// Simple Least Squares Linear Regression, from:
// http://christoph.ruegg.name/blog/2012/9/9/linear-regression-mathnet-numerics.html
let ``Fitting to a line`` =
printfn "Fitting to a line"
let X = DenseMatrix.ofColumnList 3 2 [ List.init 3 (fun i -> 1.0); [ 10.0; 20.0; 30.0 ] ]
let y = DenseVector [| 15.0; 20.0; 25.0 |]
let p = X.QR().Solve(y)
printfn "X: %A" X
printfn "y: %s" (y.ToString())
printfn "p: %s" (p.ToString())
(p.[0], p.[1])
let ``Fitting to an arbitrary linear function from noisy data`` =
printfn "Fitting to an arbitrary linear function from noisy data"
// define our target functions
let f1 x = Math.Sqrt(Math.Exp(x))
let f2 x = SpecialFunctions.DiGamma(x*x)
// sample points
let xdata = [ 1.0 .. 1.0 .. 10.0 ]
// create data samples, with chosen parameters and with gaussian noise added
let fy (noise:IContinuousDistribution) x = 2.5*f1(x) - 4.0*f2(x) + noise.Sample()
let ydata = xdata |> List.map (fy (Normal.WithMeanVariance(0.0,2.0)))
// build matrix form
let X =
[
xdata |> List.map f1
xdata |> List.map f2
] |> DenseMatrix.ofColumnList 10 2
let y = DenseVector.ofList ydata
// solve
let p = X.QR().Solve(y)
printfn "X: %A" X
printfn "y: %s" (y.ToString())
printfn "p: %s" (p.ToString())
(p.[0], p.[1])
let ``Fitting to an sine from noisy data`` =
printfn "Fitting to an sine from noisy data"
// sample points
let omega = 1.0
let xdata = [| -1.0; 0.0; 0.1; 0.2; 0.3; 0.4; 0.65; 1.0; 1.2; 2.1; 4.5; 5.0; 6.0; |]
// generate noisy data for sample points
let rnd = Random(1)
let ydata = xdata |> Array.map (fun x -> 5.0 + 2.0*Math.Sin(omega*x + 0.2) + 2.0*(rnd.NextDouble()-0.5))
let X = [
Array.create xdata.Length 1.0
xdata |> Array.map (fun x -> Math.Sin(omega*x))
xdata |> Array.map (fun x -> Math.Cos(omega*x))
] |> DenseMatrix.ofColumnSeq xdata.Length 3
let y = DenseVector ydata
let p = X.QR().Solve(y)
let a = p.[0]
let b = SpecialFunctions.Hypotenuse(p.[1], p.[2])
let c = Math.Atan2(p.[2], p.[1])
printfn "X: %A" X
printfn "y: %s" (y.ToString())
printfn "p: %s" (p.ToString())
printfn "a: %f, b: %f, c: %f" a b c
(a,b,c)
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